MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,317
rRNA: 3
Repeat region:
tmRNA: 1
tRNA: 47
misc RNA:
Total features: 2,368
Total number of protein coding genes annotated/found:
2,317
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5039|JADGLG010000001.1
SEQF5039_00569
Genome Viewer
NA
AA
702/234
130381-131082
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00568
Genome Viewer
NA
AA
1230/410
129068-130297
Type I secretion system membrane fusion protein PrsE
SEQF5039|JADGLG010000001.1
SEQF5039_00567
Genome Viewer
NA
AA
2151/717
126829-128979
Toxin RTX-I translocation ATP-binding protein
SEQF5039|JADGLG010000001.1
SEQF5039_00566
Genome Viewer
NA
AA
1269/423
125518-126786
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00565
Genome Viewer
NA
AA
573/191
124610-125182
50S ribosomal protein L25
SEQF5039|JADGLG010000001.1
SEQF5039_00564
Genome Viewer
NA
AA
1032/344
123509-124540
Ribose-phosphate pyrophosphokinase
SEQF5039|JADGLG010000001.1
SEQF5039_00561
Genome Viewer
NA
AA
849/283
122319-123167
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SEQF5039|JADGLG010000001.1
SEQF5039_00560
Genome Viewer
NA
AA
594/198
121716-122309
Outer-membrane lipoprotein LolB
SEQF5039|JADGLG010000001.1
SEQF5039_00559
Genome Viewer
NA
AA
1857/619
119718-121574
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00558
Genome Viewer
NA
AA
603/201
119550-118948
putative Nudix hydrolase NudL
SEQF5039|JADGLG010000001.1
SEQF5039_00557
Genome Viewer
NA
AA
1569/523
117134-118702
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00556
Genome Viewer
NA
AA
1497/499
115287-116783
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00555
Genome Viewer
NA
AA
438/146
114836-115273
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00554
Genome Viewer
NA
AA
996/332
113715-114710
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00553
Genome Viewer
NA
AA
2562/854
112930-110369
Bifunctional uridylyltransferase/uridylyl-removing enzyme
SEQF5039|JADGLG010000001.1
SEQF5039_00552
Genome Viewer
NA
AA
1692/564
108185-109876
Quinone-dependent D-lactate dehydrogenase
SEQF5039|JADGLG010000001.1
SEQF5039_00551
Genome Viewer
NA
AA
276/92
107735-108010
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00550
Genome Viewer
NA
AA
411/137
107341-107751
hypothetical protein
SEQF5039|JADGLG010000001.1
SEQF5039_00549
Genome Viewer
NA
AA
312/104
106924-107235
putative protein YqjD
SEQF5039|JADGLG010000001.1
SEQF5039_00548
Genome Viewer
NA
AA
1050/350
106650-105601
putative formaldehyde dehydrogenase AdhA
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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